Package org.biojava.nbio.survival.cox

Class CoxCoefficient

  • public class CoxCoefficient
extends java.lang.Object
    Author:
    Scooter Willis

    • Constructor Detail

      • CoxCoefficient

        public CoxCoefficient()

    • Method Detail

      • toString

        public java.lang.String toString()
        Overrides:
        toString in class java.lang.Object

      • getHRText

        public java.lang.String getHRText()
        Returns:

      • getName

        public java.lang.String getName()
        Returns:
        the name

      • getCoeff

        public double getCoeff()
        Returns:
        the coeff

      • getStdError

        public double getStdError()
        Returns:
        the stdError

      • getRobustStdError

        public double getRobustStdError()
        Returns:
        the robustStdError

      • getZ

        public double getZ()
        Returns:
        the z

      • getHazardRatio

        public double getHazardRatio()
        Returns:
        the hazardRatio

      • getHazardRatioLoCI

        public double getHazardRatioLoCI()
        Returns:
        the hazardRatioLoCI

      • getHazardRatioHiCI

        public double getHazardRatioHiCI()
        Returns:
        the hazardRatioHiCI

      • getPvalue

        public double getPvalue()
        Returns:
        the pvalue

      • getMean

        public double getMean()
        Returns:
        the mean

      • getStandardDeviation

        public double getStandardDeviation()
        Returns:
        the standardDeviation

      • setName

        public void setName​(java.lang.String name)
        Parameters:
        name - the name to set

      • setCoeff

        public void setCoeff​(double coeff)
        Parameters:
        coeff - the coeff to set

      • setStdError

        public void setStdError​(double stdError)
        Parameters:
        stdError - the stdError to set

      • setRobustStdError

        public void setRobustStdError​(double robustStdError)
        Parameters:
        robustStdError - the robustStdError to set

      • setZ

        public void setZ​(double z)
        Parameters:
        z - the z to set

      • setHazardRatio

        public void setHazardRatio​(double hazardRatio)
        Parameters:
        hazardRatio - the hazardRatio to set

      • setHazardRatioLoCI

        public void setHazardRatioLoCI​(double hazardRatioLoCI)
        Parameters:
        hazardRatioLoCI - the hazardRatioLoCI to set

      • setHazardRatioHiCI

        public void setHazardRatioHiCI​(double hazardRatioHiCI)
        Parameters:
        hazardRatioHiCI - the hazardRatioHiCI to set

      • setPvalue

        public void setPvalue​(double pvalue)
        Parameters:
        pvalue - the pvalue to set

      • setMean

        public void setMean​(double mean)
        Parameters:
        mean - the mean to set

      • setStandardDeviation

        public void setStandardDeviation​(double standardDeviation)
        Parameters:
        standardDeviation - the standardDeviation to set

      • fmt

        public static java.lang.String fmt​(java.lang.Double d,
                                   int precision,
                                   int pad)
        Parameters:
        d -
        precision -
        pad -
        Returns: