Class CalcBioAssemblySymmetry
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- org.biojava.nbio.structure.symmetry.analysis.CalcBioAssemblySymmetry
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public class CalcBioAssemblySymmetry extends java.lang.Object
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Constructor Summary
Constructors Constructor Description CalcBioAssemblySymmetry(Structure bioAssembly, QuatSymmetryParameters parameters)
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Method Summary
All Methods Instance Methods Concrete Methods Deprecated Methods Modifier and Type Method Description QuatSymmetryParametersgetParameters()RotationGroupgetRotationGroup()Deprecated.JmolSymmetryScriptGeneratorgetScriptGenerator()SubunitsgetSubunits()java.lang.StringgetSymmetry()String representation of Symmetry, e.g.QuatSymmetryDetectororient()
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Constructor Detail
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CalcBioAssemblySymmetry
public CalcBioAssemblySymmetry(Structure bioAssembly, QuatSymmetryParameters parameters)
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Method Detail
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getParameters
public QuatSymmetryParameters getParameters()
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orient
public QuatSymmetryDetector orient()
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getRotationGroup
@Deprecated public RotationGroup getRotationGroup()
Deprecated.Only works if this is not helical symmetry. Deprecated, use getSymmetry instead
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getSubunits
public Subunits getSubunits()
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getSymmetry
public java.lang.String getSymmetry()
String representation of Symmetry, e.g. C1, C2, H- Returns:
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getScriptGenerator
public JmolSymmetryScriptGenerator getScriptGenerator()
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