Uses of Class
org.snpsift.annotate.AnnotateVcfDb

Packages that use AnnotateVcfDb

Package	Description
org.snpsift
org.snpsift.annotate

Uses of AnnotateVcfDb in org.snpsift

Fields in org.snpsift declared as AnnotateVcfDb

Modifier and Type	Field	Description
protected AnnotateVcfDb	SnpSiftCmdAnnotate.annotateDb

Uses of AnnotateVcfDb in org.snpsift.annotate

Subclasses of AnnotateVcfDb in org.snpsift.annotate

Modifier and Type	Class	Description
class	AnnotateVcfDbMem	Annotate using a VCF "database" Note: Reads and loads the whole VCF file into memory
class	AnnotateVcfDbSorted	Annotate using a VCF "database" Note: Assumes that the VCF database file is sorted.
class	AnnotateVcfDbTabix	Annotate using a tabix indexed VCF "database"